Where possible pipelines should use the same command line option names as other pipelines for comparable options.
In addition to the names of parameters, they should ideally work in a similar way.
--input typically takes a
.csv sample sheet file (but not always, where not appropriate).
We’re planning to build a tool that lists every parameter used by every pipeline, so that you can check for existing parameters with similar names You can track the progress of this feature request here: nf-core/website#1251