List subworkflows

The nf-core subworkflows list command provides the subcommands remote and local for listing subworkflows installed in a remote repository and in the local pipeline respectively. Both subcommands allow to use a pattern for filtering the subworkflows by keywords eg: nf-core subworkflows list <subworkflow_name> <keyword>.

List remote subworkflows

To list all subworkflows available on nf-core/modules, you can use nf-core subworkflows list remote, which will print all available subworkflows to the terminal.

nf-core subworkflows list remote

List installed subworkflows

To list subworkflows installed in a local pipeline directory you can use nf-core subworkflows list local. This will list the subworkflows install in the current working directory by default. If you want to specify another directory, use the --dir <pipeline_dir> flag.

nf-core subworkflows list local