List pipelines

The command nf-core list shows all available nf-core pipelines along with their latest version, when that was published and how recently the pipeline code was pulled to your local system (if at all).

An example of the output from the command is as follows:

nf-core list

To narrow down the list, supply one or more additional keywords to filter the pipelines based on matches in titles, descriptions and topics:

nf-core list rna rna-seq

You can sort the results by latest release (-s release, default), when you last pulled a local copy (-s pulled), alphabetically (-s name), or number of GitHub stars (-s stars).

nf-core list -s stars

To return results as JSON output for downstream use, use the --json flag.

Archived pipelines are not returned by default. To include them, use the --show_archived flag.