Welcome

Join us from September 6-8 2023 for the Community Nextflow & nf-core Training event!

The Community Nextflow and nf-core Training is entirely virtual and free and will cover the fundamentals of using Nextflow and nf-core. While the training will offer something for all skill levels it will be especially useful for those who are new to Nextflow and the nf-core community.

Accessing the streams

To make the workshops available to everyone they will be streamed on the Foundational training playlist on the nf-core YouTube channel.

Schedule

Training sessions will be available from 3 pm (CEST) each day. Each session will be approximately 2.5 - 3 hours and will include a short break.

The training will consist of two days of Nextflow and one day of nf-core training. The material covered will be very similar to what has already been shown in previous community training events.

Session 1

• An introduction to Nextflow
• Setting up your training environment
• Getting started with Nextflow
• Configuration
• Managing dependencies
• Deployment scenarios

Session 2

• Channels
• Processes
• Operators
• Cache and resume
• Proof of concept RNAseq pipeline

Session 3

• An introduction to nf-core
• nf-core for users
• nf-core for developers

Asking questions

Questions can be asked in the Slack channels created for this event. Community volunteers will monitor these channels and will answer your questions as quickly as they can. You can join the nf-core Slack here.

We have created the #sept23-training-foundational Slack channel for this event. You can find it by searching the channel list in the top left-hand corner of your Slack window. Community volunteers will monitor these channels and will help answer your questions.

Please be aware that due to the size of this event there may be a delay when answering your questions.

Registration

Registration for the training is now closed.

Code of conduct

Please note that by attending the training event you are agreeing to abide by our Code of Conduct.